Accueil: Soyagen

Notre projet de recherche

Résumé du projet

Objectifs du projet

Livrables

Résultats

Équipe

François Belzile

Richard Bélanger

Elroy Cober

Richard Gray

Eric Micheels

Benjamin Mimee

Louise O’Donoughue

Istvan Rajcan

Tom Warkentin

Institutions participantes

Nos partenaires

Publications récentes

Stable predictive markers for Phytophthora sojae avirulence genes that impair infection of soybean uncovered by whole genome sequencing of 31 isolates

Background: The interaction between oomycete plant pathogen Phytophthora sojae and soybean is characterized by the presence of avirulence (Avr) genes...

Genome Scans Reveal Homogenization and Local Adaptations in Populations of the Soybean Cyst Nematode

Determining the adaptive potential of alien invasive species in a new environment is a key concern for risk assessment. As climate change is affecting...

Identification of novel loci associated with maturity and yield traits in early maturity soybean plant introduction lines

Background

To continue to meet the increasing demands of soybean worldwide, it is crucial to identify key genes regulating flowering and maturity to...

Efficient genome-wide genotyping strategies and data integration in crop plants

Next-generation sequencing technologies provide powerful and flexible genotyping methods to plant breeders and researchers. These methods offer a wide...

A Systematic Analytical Approach to Rapidly Identify Candidate Domestication-Related Genes

Domestication is an important key co-evolutionary process through which humans have extensively altered the genomic make-up and appearance of both...

Identification of large deletions in mutant soybean lines from genotyping-by-sequencing (GBS) data

Genotyping-by-sequencing (GBS) allows efficient identification and genotyping of a large number of molecular markers by sequencing a constant subset...

Development of a simple hydroponic assay to study vertical and horizontal resistance of soybean and pathotypes of Phytophthora sojae

Phytophthora root rot, caused by Phytophthora sojae, is one of the most damaging diseases of soybean and the introgression of Rps (Resistance to P....

Comprehensive Description of Genome-Wide Nucleotide and Structural Variation in Short-Season Soybean

Next-generation sequencing (NGS) and bioinformatics tools have greatly facilitated the characterization of nucleotide variation; nonetheless, an...

Comprehensive Description of Genome-Wide Nucleotide and Structural Variation in Short-Season Soybean

Next-generation sequencing (NGS) and bioinformatics tools have greatly facilitated the characterization of nucleotide variation; nonetheless, an...

Combining high-throughput molecular approaches and QTL analysis to select genes showing differential response to Sclerotinia stem rot in soybean

The tremendous throughput of modern DNA sequencing technology has allowed the resequencing of hundreds of soybean accessions, thus providing a...

Fast-GBS: a new pipeline for the efficient and highly accurate calling of SNPs from genotyping-by-sequencing data

Background: Next-generation sequencing (NGS) technologies have accelerated considerably the investigation into the composition of genomes and their...

Genome-Wide SNP Calling from Genotyping by Sequencing (GBS) Data: A Comparison of Seven Pipelines and Two Sequencing Technologies

Next-generation sequencing (NGS) has revolutionized plant and animal research in many ways including new methods of high throughput genotyping....

A systematic approach to routinely define haplotypes (and alleles) on the basis of dense SNP data

Genes responsible for economic traits have been abundantly reported and still continue to be. For such known genes, breeding mostly aims to assess the...

A gold mine of nucleotide and structural variation in soybean

In this work, we report the resequencing of a collection of 102 Canadian soybean accessions. Selection of these lines was guided by a detailed...

Strutural and nucleotide variation of Phytophthora sojae isolates in Canada through whole genome sequencing

Fast-GBS: a new pipeline for the efficient and accurate calling of SNPs from genotyping-by-sequencing data

Genotyping-by-sequencing (GBS) has been demonstrated to be a robust and cost-effective genotyping method capable of producing thousands to millions of...